Reads a stutter exceptions file with overrides for expected stutter ratios

Reads a stutter exceptions file with overrides for expected stutter ratios

Usage

read_stutter_exceptions(filename)

Arguments

filename

Character. Path to file.

Value

A named list with the stutter exceptions by locus. For each loucs, the exceptions are given as a named numeric with the names corresponding to the parent alleles and the expected stutter rates given as the values.

Details

Reads the file from disk and returns a named numeric vector with stutter ratio exceptions for a given locus and allele.

Examples

filename <- system.file("extdata","GlobalFiler_Stutter_Exceptions_3500.csv",
                        package = "simDNAmixtures")
exceptions <- read_stutter_exceptions(filename)
exceptions$TH01["9.3"]
#>     9.3 
#> 0.01375